Schedule

Friday (14 November 2025)

09:00 - 09:10 Welcome

09:10 - 09:25 NBIS support and training (Elin Kronander)

09:25 - 09:55 Lecture: Analysis of Whole Genome Bisulfite Sequencing data (Louella Vasquez)

09:55 - 10:15 Uppmax set up

10:15 - 10:30 Fika

10:30 - 12:00 Exercises on WGBS

12:00 - 13:00 Lunch

13:00 - 13:30 Introduction to workflow and epigenomics workflows (Agata Smialowska)

13:30 - 14:00 Lecture: Processing of ONT data and methylation calling (Louella Vasquez)

14:00 - 15:00 Exercises on ONT and workflows

15:00 - 15:15 Fika

15:15 - 15:45 Exercises on ONT and workflows

15:45 - 16:00 Course wrap up